NMR- data [1] of threonine:
Atom | Atomtyp | chemical shift [ppm]1 | Random Coil chem. shift3 |
Random Coil chem. shift 4 |
|||
---|---|---|---|---|---|---|---|
average | standard deviation | entrie2 | |||||
H | H | 8.244 | 1.139 | 44831 | 8.15 | 8.15 | |
Hα | H | 4.458 | 0.556 | 34443 | 4.35 | 4.61 | |
Hβ | H | 4.172 | 0.837 | 31798 | 4.24 | 4.11 | |
Hγ1 | H | 5.311 | 1.322 | 1227 | – | – | |
Hγ2 | H | 1.139 | 0.331 | 31493 | 1.21 | 1.23 | |
C | C | 174.464 | 4.246 | 27922 | 174.7 | 173.2 | |
Cα | C | 62.245 | 2.658 | 38914 | 61.8 | 59.8 | |
Cβ | C | 69.599 | 6.601 | 36242 | 69.8 | 69.8 | |
Cγ2 | C | 21.591 | 1.984 | 25736 | 21.5 | 21.4 | |
N | N | 115.489 | 6.833 | 41840 | 113.6 | 116.0 | |
proportion in proteins | pK2 COOH | pK1COOH | isoelectrical point |
pK1NH2 | pK2NH2 | ||
6.0% | – | 2.1 | 5.6 | 9.12 | – | ||
CAS- number | molar mass | formula | density | melting point | solubility | ||
|
119,12 g·mol−1 | C4H9NO3 | 255–257 °C (decomposition)(L-Threonine) | not good in water (90 g·l−1 at 20 °C), unsoluble in organic solvents |
1 Depending on the type of atom it was 1H, 13C or 15N chemical shift. 1H und 13C relative to TMS and 15N relative to liquid ammonia
2 Number of individual chemical shift data for averaging according to [2]
3 with Alanine as neighborhood in the hexapeptide Gly-Gly-X-Ala-Gly-Gly [3]
4 with Proline as neighborhood in the hexapeptide Gly-Gly-X-Pro-Gly-Gly [3]
3D- Modell
sources:
[1] “BioMagResBank”, Eldon L. Ulrich; Hideo Akutsu; Jurgen F. Doreleijers; Yoko Harano; Yannis E. Ioannidis; Jundong Lin; Miron Livny; Steve Mading; Dimitri Maziuk; Zachary Miller; Eiichi Nakatani; Christopher F. Schulte; David E. Tolmie; R. Kent Wenger; Hongyang Yao; John L. Markley; Nucleic Acids Research 36, D402-D408 (2008) doi: 10.1093/nar/gkm957
[2] http://www.bmrb.wisc.edu/ last visit march 2017
[3] David S. Wishart, Colin G. Bigam, Arne Holm, Robert S. Hodges, Brian D. Sykes; Journal of Biomolecular NMR
January 1995, Volume 5, Issue 1, pp 67-81 doi:10.1007/BF00227471
[4] Wikipedia http://de.wikipedia.org/wiki/Aminos%C3%A4uren (last visit january 2014)
[5] Wikipedia http://de.wikipedia.org/wiki/Alanin (las visit Januar 2014)proportion of proteinsproportion of proteins
3D Mol: Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829