NMR-data [1] of glycine:
Atom | Atomtyp | chemical shift [ppm]1 | Random Coil chem. shift 3 |
Random Coil chem. shift 4 |
|||
---|---|---|---|---|---|---|---|
average | standard deviation | entries2 | |||||
H | H | 8.332 | 0.929 | 59854 | 8.33 | 8.21 | |
Hα2 | H | 3.963 | 0.40 | 45419 | 3.96 | 4.13 | |
Hα3 | H | 3.891 | 0.414 | 43279 | |||
C | C | 173.825 | 3.967 | 37674 | 174.9 | 174.5 | |
Cα | C | 45.377 | 1.624 | 52443 | 45.1 | 44.5 | |
N | N | 109.762 | 7.858 | 55256 | 108.8 | 109.1 | |
proportion of proteines | pK2 COOH | pK1COOH | isoelectrical point |
pK1NH2 | pK2NH2 | ||
7.5% | – | 2.21 | 5.97 | 9.15 | – | ||
CAS- number | molar mass | formula | density | melting point | solubility | ||
56-40-6 | 75,07 g·mol−1 | C2H5NO2 | 1,60 g·cm−3 | decomposition: 232–236 °C | good in water (249,9 g·kg−1 at 25 °C; 391,0 g·kg−1 at 50 °C; 543,9 g·kg−1 at 75 °C; 671,7 g·kg−1 at 100 °C) |
1 Depending on the type of atom it was 1H, 13C or 15N chemical shift. 1H und 13C relative to TMS and 15N relative to liquid ammonia
2 Number of individual chemical shift data for averaging according to [2]
3 with Alanine as neighborhood in the hexapeptide Gly-Gly-X-Ala-Gly-Gly [3]
4 with Proline as neighborhood in the hexapeptide Gly-Gly-X-Pro-Gly-Gly [3]
3D- Modell
sources:
[1] “BioMagResBank”, Eldon L. Ulrich; Hideo Akutsu; Jurgen F. Doreleijers; Yoko Harano; Yannis E. Ioannidis; Jundong Lin; Miron Livny; Steve Mading; Dimitri Maziuk; Zachary Miller; Eiichi Nakatani; Christopher F. Schulte; David E. Tolmie; R. Kent Wenger; Hongyang Yao; John L. Markley; Nucleic Acids Research 36, D402-D408 (2008) doi: 10.1093/nar/gkm957
[2] http://www.bmrb.wisc.edu/ last visit march 2017
[3] David S. Wishart, Colin G. Bigam, Arne Holm, Robert S. Hodges, Brian D. Sykes; Journal of Biomolecular NMR
January 1995, Volume 5, Issue 1, pp 67-81 doi:10.1007/BF00227471
[4] Wikipedia http://de.wikipedia.org/wiki/Aminos%C3%A4uren (last visit january 2014)
[5] Wikipedia http://de.wikipedia.org/wiki/Asparagin (last visit january 2014)
3D Mol: Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829